Original Articles

Real-time assessment of plant photosynthetic pigment contents with an artificial intelligence approach in a mobile application

Publisher's note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.
Received: 13 May 2020
Published: 21 December 2020
3308
Views
1174
Downloads
298
HTML

Authors

The assessment of the photosynthetic pigment contents in plants is a common procedure in agricultural studies and can describe plant conditions, such as their nutritional status, response to environmental changes, senescence, disease status and so forth. In this report, we show how the photosynthetic pigment contents in plant leaves can be predicted non-destructively and in real-time with an artificial intelligence approach. Using a convolutional neural network (CNN) model that was embedded in an Androidbased mobile application, a digital image of a leaf was processed to predict the three main photosynthetic pigment contents: chlorophyll, carotenoid and anthocyanin. The data representation, low sample size handling and developmental strategies of the best CNN model are discussed in this report. Our CNN model, photosynthetic pigment prediction network (P3Net), could accurately predict the chlorophyll, carotenoid and anthocyanin contents simultaneously. The prediction error for anthocyanin was ±2.93 mg/g (in the range of 0-345.45 mg/g), that for carotenoid was ±2.14 mg/g (in the range of 0-211.30 mg/g) and that for chlorophyll was ±5.75 mg/g (in the range of 0-892.25 mg/g). This is a promising result as a baseline for the future development of IoT smart devices in precision agriculture.

Downloads

Download data is not yet available.

APHA (American Public Health Association)., 1995. Standard Methods for the Examination of Water and Wastewater, 19th Edition, Washington, D.C.

Capasso, R., Cristinzio, G., Evidente, A., Scognamiglio, F., 1992. Isolation, spectroscopy and selective phytotoxic effects of polyphenols from vegetable waste waters. Phytochemistry, 31, 4125-4128. DOI: https://doi.org/10.1016/0031-9422(92)80426-F

Caputo, M.C., De Girolamo, A.M., Volpe, A., 2013. Soil amendment with olive mill wastes: Impact on groundwater. J. Environ Manage., 131, 216-221. DOI: https://doi.org/10.1016/j.jenvman.2013.10.004

Colarieti, M.L., Toscano, G., Greco, G., 2006. Toxicity attenuation of olive mill wastewater in soil slurries. Environ. Chem. Lett. 4, 115-118. DOI: https://doi.org/10.1007/s10311-006-0050-5

Comegna, A., Coppola, A., Dragonetti, G., Sommella, A., 2013a. Dielectric response of a variable saturated soil contaminated by Non-Aqueous Phase Liquids (NAPLs). Procedia Environmental Sciences, 19, 701-710. DOI: https://doi.org/10.1016/j.proenv.2013.06.079

Comegna, A., Coppola, A., Dragonetti, G., Severino, G., Sommella A., Basile A., 2013b. Dielectric properties of a tilled sandy volcanic-vesuvian soil with moderate andic features. Soil Till. Res., 133, 93-100. DOI: https://doi.org/10.1016/j.still.2013.06.003

Comegna, A., Coppola, A., Dragonetti, G., Sommella, A., 2016. Estimating non-aqueous phase liquid (NAPL) content in variable saturated soils using time domain reflectometry (TDR). Vadose zone J., 15, doi:10.2136/vzj2015.11.0145. DOI: https://doi.org/10.2136/vzj2015.11.0145

Comegna, A., Coppola, A., Dragonetti, G., Severino, G., Sommella, A., 2017. Interpreting TDR Signal Propagation through Soils with Distinct Layers of Nonaqueous-Phase Liquid and Water Content. Vadose Zone J. 16(13). doi:10.2136/vzj2017.07.0141. DOI: https://doi.org/10.2136/vzj2017.07.0141

Comegna, A., Coppola, A., Dragonetti, G., Sommella, A., 2019. A soil non-aqueous phase liquid (NAPL) flushing laboratory experiment based on measuring the dielectric properties of soil–organic mixtures via time domain reflectometry (TDR). Hydrol. Earth Syst. Sci., 23, 3593-3602, https://doi.org/10.5194/hess-23-3593-2019, 2019. DOI: https://doi.org/10.5194/hess-23-3593-2019

Dalton, F.N., Herkelrath, W.N, Rawlins, D.S., Rhoades, J.D., 1984. Time-domain reflectometry: Simultaneous measurements of soil water content and electrical conductivity with a single probe. Science, 224, 989-990. DOI: https://doi.org/10.1126/science.224.4652.989

Francisca, M., Montoro, M.A., 2012. Measuring the dielectric properties of soil-organic mixtures using coaxial impedance dielectric reflectometry, J. Appl. Geophys., 80, 101–109. DOI: https://doi.org/10.1016/j.jappgeo.2012.01.011

Giese, K., Tiemann, R., 1974. Determination of the complex permittivity from thin-sample time domain reflectometry: Improved analysis of the step response waveform. Adv. Mol. Relaxation Processes, 7, 45-49. DOI: https://doi.org/10.1016/0001-8716(75)80013-7

Goovaerts, P., AvRuskin, G., Meliker, J., Slotnick, M., Jacquez, G., Nriagu, J., 2005. Geostatistical modeling of the spatial variability of arsenic in groundwater of southeast Michigan. Water Resour. Res., 41, W07013, doi:10.1029/2004WR003705. DOI: https://doi.org/10.1029/2004WR003705

Haridy, S.A., Persson, M., Berndtsson, R., 2004. Estimation of LNAPL saturation in fine sand using time-domain reflectometry. Hydrological Sciences, 49, 987-1000. DOI: https://doi.org/10.1623/hysj.49.6.987.55729

Huisman, J.A., Hubbard, S.S., Redman, J.D., and Annan, A.P., 2003. Measuring soil water content with ground penetrating radar: A review. Vadose Zone J., 2, 476-491. DOI: https://doi.org/10.2113/2.4.476

IUSS Working Group WRB, 2006. World reference base for soil resources 2006: A framework for international classification, correlation and communication. 2nd ed. World Soil Resour. Rep. 103, FAO, Rome.

Kavvadias, V., Doula, M., Theocharopoulosm S., 2014. Long-Term Effects on Soil of the Disposal of Olive Mill Waste Waters (OMW). Environmental Forensic, 15, 37-51. DOI: https://doi.org/10.1080/15275922.2013.872713

Jung, S., Drnevich V.P., Abou Najm, M.R., 2013. New methodology for density and water content by time domain reflectometry. J. Geotech. Geoenviron. Eng., 139, 659–670. doi:10.1061/(ASCE)GT.1943-5606.0000783. DOI: https://doi.org/10.1061/(ASCE)GT.1943-5606.0000783

IRSA-CNR, 2003. Metodi analitici per le acque. Volume Primo, pp 781-789.

Isidori, M., Lavorgna, M., Nardelli, A., Parrella, A., 2005. Model study on the effect of 15 phenolic olive mill wastewater constituents on seed germination and vibro fischeri metabolism. J. Agric. Food Chem., 53, 8414-8417. DOI: https://doi.org/10.1021/jf0511695

Legates, D.R., McCabe Jr, G.J., 1999. Evaluating the use of "goodness-of-fit" measures in hydrologic and hydroclimatic model validation. Water Resour. Res., 35, 233-241. DOI: https://doi.org/10.1029/1998WR900018

Mekki, A., Dhouib, A., Sayadi, S., 2006. Changes in microbial and soil properties following amendment with treated and untreated olive mill wastewater. Microbiol. Res., 161, 93-101. DOI: https://doi.org/10.1016/j.micres.2005.06.001

Moroizumi, T., Sasaki, Y., 2006. Estimating the nonaqueous-phase liquid content in saturated sandy soil using amplitude domain reflectometry. Soil Sci. Soc. Am. J., 72, 1520-1526. DOI: https://doi.org/10.2136/sssaj2006.0212

Or, D., Jones, S.B., VanShaar, J.R., Humphries, S., Koberstein, L., 2004. Win TDR Soil Analysis Software User Guide. Utah State University.

Piotrowska, A., Rao, M.A, Scotti, R., Gianfreda, L., 2011. Changes in soil chemical and biochemical properties following amendment with crude and dephenolized olive mill waste water (OMW). Geoderma, 161, 8-17. DOI: https://doi.org/10.1016/j.geoderma.2010.11.011

Persson, M., Berndtsson, R., 2002. Measuring nonaqueous phase liquid saturation in soil using time domain reflectometry, Water Resour. Res, 38, doi: 10.1029/2001WR000523. DOI: https://doi.org/10.1029/2001WR000523

Redman, J.D., De Ryck, S.M., 1994. Monitoring non-aqueous phase liquids in the subsurface with multilevel time domain reflectometry probes. Proc Symp. on Time Domain Reflectometry in Environmental, Infrastructure, and Mining Applications, Evanston, IL. Spec. Publ. SP19-94. U.S. Bur. of Mines, Washington, DC.

Rinaldi, V.A., Francisca, F.M., 2006. Removal of Immiscible Contaminants from Sandy Soils monitored by Means of Dielectric Measurements. J. Environ. Eng., 132, 931-939. DOI: https://doi.org/10.1061/(ASCE)0733-9372(2006)132:8(931)

Robinson, D.A., Jones, S.B., Wraith, J.M., Or, D., 2003. A review of advances in dielectric and electric conductivity measurements using time domain reflectometry. Vadose Zone J., 2, 444-475. DOI: https://doi.org/10.2136/vzj2003.4440

Sahraoui, H., Kanzari, S., Hachicha, M., Mellouli, H.J., 2015. Olive Mill Wastewater Spreading Effects On Hydraulic Soil Properties. The experiment, 30, 2002-2011, 2015.

Topp, G.C., Davis, J.L., Annan, A.P., 1980. Electromagnetic determination of soil water content: Measurement in coaxial transmission lines, Water Resour. Res., 16, 574-582. DOI: https://doi.org/10.1029/WR016i003p00574

How to Cite



“Real-time assessment of plant photosynthetic pigment contents with an artificial intelligence approach in a mobile application” (2020) Journal of Agricultural Engineering, 51(4), pp. 220–228. doi:10.4081/jae.2020.1082.